The following code checks if a directory exists, if not it is created. It then moves a file into that directory.

This is ideal code to run before an ftp script as it will prevent a half written file being transmitted via FTP.

@echo off
if not exist "C:\Folder\Destination"
(
md "C:\Folder\Destination"
)
move "C:\Folder\Source\*.*"
"C:\Folder\Destination"
pause

The pause command lets you see the results of the script. Remove it if automated on a Windows Scheduled Task.